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«A Thesis Presented to the Faculty of the Graduate School of Cornell University In Partial Fulfillment of the Requirements for the Degree of Master of ...»

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15480423,20130407 FT407A,ALT-1-3,40,,ok,3.995626211,50.26021194,20130407 FT407A,ALT-1-4,60,,ok,3.975332737,53.18213272,20130407 FT407A,ALT-2-1,0.083,,ok,3.9955163,50.54731369,20130407 FT407A,ALT-2-2,20,,ok,3.986747742,51.93001938,20130407 FT407A,ALT-2-3,40,,ok,3.988153458,51.64327621,20130407 FT407A,ALT-2-4,60,,ok,3.986857414,50.91676331,20130407 FT407A,ALC-1-1,0.083,,ok,3.990515947,52.34833527,20130407 FT407A,ALC-1-2,20,,ok,3.982662439,49.8983345,20130407 FT407A,ALC-1-3,40,,ok,3.982032299,53.04565048,20130407 FT407A,ALC-1-4,60,,ok,3.981139898,53.1875,20130407 FT407A,ALC-2-1,0.083,,ok,3.98506999,51.95884705,20130407 FT407A,ALC-2-2,20,,ok,3.982728243,53.19135666,20130407 FT407A,ALC-2-3,40,,ok,3.984479427,50.91666794,20130407 FT407A,ALC-2-4,60,,ok,3.989935398,52.031147,20130407 FT407A,0.33,,CAL,ok,3.993649483,54.85055161,20130407 FT407A,0.5,,CAL,ok,3.983324051,79.20446014,20130407 FT407A,0.8,,CAL,ok,3.98451972,116.5658035,20130407,no data,,,ok,NA,NA, FT407B,CHK N2O,,CHK,ok,3.981327057,158.1448059,20130407 FT407B,CHK CH4,,CHK,ok,0,0,20130407 FT407B,0.33,,CAL,ok,3.983754158,54.58490372,20130407 FT407B,0.5,,CAL,ok,3.983537674,73.46832275,20130407 FT407B,0.8,,CAL,ok,3.987605572,111.9050064,20130407 FT407B,BHT-1-1,0.083,,ok,3.978952408,48.42222214,20130407 FT407B,BHT-1-2,20,,ok,3.980825901,51.64312744,20130407 FT407B,BHT-1-3,40,,ok,3.968488216,53.21981812,20130407 FT407B,BHT-1-4,60,,ok,3.974565029,54.18582153,20130407 FT407B,BHT-2-1,0.083,,ok,3.97992444,52.36854553,20130407 FT407B,BHT-2-2,20,,ok,3.985894442,53.55563736,20130407 FT407B,BHT-2-3,40,,ok,3.98746109,53.44496918,20130407 FT407B,BHT-2-4,60,,ok,3.983526707,52.09754181,20130407 FT407B,BHC-1-1,0.083,,ok,3.985787392,52.84629059,20130407 FT407B,BHC-1-2,20,,ok,3.984228849,53.39458466,20130407 FT407B,BHC-1-3,40,,ok,3.975447416,52.94028854,20130407 FT407B,BHC-1-4,60,,ok,3.969279289,55.27459335,20130407 FT407B,BHC-2-1,0.083,,ok,3.979038954,49.33208084,20130407 FT407B,BHC-2-2,20,,ok,3.983652353,52.70779419,20130407 FT407B,BHC-2-3,40,,ok,3.97594142,50.13479614,20130407 FT407B,BHC-2-4,60,,ok,3.99691987,53.79781342,20130407 FT407B,BLT-1-1,0.083,,ok,3.984643698,50.96130371,20130407 FT407B,BLT-1-2,20,,ok,3.982343912,48.43089294,20130407 FT407B,BLT-1-3,40,,ok,3.974568129,52.47223663,20130407 FT407B,BLT-1-4,60,,ok,4.020741463,51.59581757,20130407 FT407B,BLT-2-1,0.083,,ok,3.984303236,53.0368042,20130407 FT407B,BLT-2-2,20,,ok,3.977492571,54.70573044,20130407 FT407B,BLT-2-3,40,,ok,3.984415293,51.77875137,20130407 FT407B,BLT-2-4,60,,ok,3.977298021,53.54938889,20130407 FT407B,BLC-1-1,0.083,,ok,3.984287262,52.79310989,20130407 FT407B,BLC-1-2,20,,ok,3.986691713,51.41692352,20130407 FT407B,BLC-1-3,40,,ok,3.990215302,51.89698029,20130407 FT407B,BLC-1-4,60,,ok,3.984909296,51.47955704,20130407 FT407B,BLC-2-1,0.083,,ok,3.982010841,53.63015747,20130407 FT407B,BLC-2-2,20,,ok,3.983134508,55.10687637,20130407 FT407B,BLC-2-3,40,,ok,3.977828264,53.38042068,20130407 FT407B,BLC-2-4,60,,ok,3.974670649,55.59208679,20130407 FT407B,0.33,,CAL,ok,3.978639126,59.03907013,20130407 FT407B,0.5,,CAL,ok,3.975943804,78.30001831,20130407 FT407B,0.8,,CAL,ok,3.982971907,116.6857376,20130407,no data,,,ok,NA,NA, FT407C,CHK N2O,,CHK,ok,3.965792179,162.6423645,20130407   66   FT407C,CHK CH4,,CHK,ok,0,0,20130407 FT407C,0.33,,CAL,REJY,0,0,20130407 FT407C,0.5,,CAL,ok,4.009696484,74.3240509,20130407 FT407C,0.8,,CAL,ok,3.97299099,118.3697433,20130407 FT407C,CHT-1-1,0.083,,ok,3.972617388,53.94656372,20130407 FT407C,CHT-1-2,20,,ok,3.957961321,54.2076416,20130407 FT407C,CHT-1-3,40,,ok,3.9674685,54.77637482,20130407 FT407C,CHT-1-4,60,,ok,3.971216679,50.58041763,20130407 FT407C,CHT-2-1,0.083,,ok,3.975116968,52.79143143,20130407 FT407C,CHT-2-2,20,,ok,3.977284908,54.01041794,20130407 FT407C,CHT-2-3,40,,ok,3.9651227,53.76416779,20130407 FT407C,CHT-2-4,60,,ok,3.98116231,53.42552185,20130407 FT407C,CHC-1-1,0.083,,ok,3.984470844,51.26623535,20130407 FT407C,CHC-1-2,20,,ok,3.999518394,50.54003906,20130407 FT407C,CHC-1-3,40,,ok,3.982732058,53.22417068,20130407 FT407C,CHC-1-4,60,,ok,3.96036005,52.65760803,20130407 FT407C,CHC-2-1,0.083,,ok,3.975717068,51.97166824,20130407 FT407C,CHC-2-2,20,,ok,3.978740454,51.15417099,20130407 FT407C,CHC-2-3,40,,ok,3.976657152,53.49446869,20130407 FT407C,CHC-2-4,60,,ok,3.981947422,52.18395996,20130407 FT407C,CLT-1-1,0.083,,ok,3.968791246,50.16356659,20130407 FT407C,CLT-1-2,20,,ok,3.966284513,51.67677307,20130407 FT407C,CLT-1-3,40,,ok,3.970842361,51.42186737,20130407 FT407C,CLT-1-4,60,,ok,3.968459368,52.2567749,20130407 FT407C,CLT-2-1,0.083,,ok,3.968489408,53.68135834,20130407 FT407C,CLT-2-2,20,,ok,3.973982334,53.74250412,20130407 FT407C,CLT-2-3,40,,ok,3.964577198,52.19338226,20130407 FT407C,CLT-2-4,60,,ok,3.965631247,52.9087944,20130407 FT407C,CLC-1-1,0.083,,ok,3.972883701,53.19511795,20130407 FT407C,CLC-1-2,20,,ok,3.944275141,52.90975571,20130407 FT407C,CLC-1-3,40,,ok,3.974517107,56.09847641,20130407 FT407C,CLC-1-4,60,,ok,3.965084553,54.66653824,20130407 FT407C,CLC-2-1,0.083,,ok,3.968548059,55.62149048,20130407 FT407C,CLC-2-2,20,,ok,3.971274614,54.15021133,20130407 FT407C,CLC-2-3,40,,ok,3.968121529,55.76135635,20130407 FT407C,CLC-2-4,60,,ok,3.968103647,54.14323044,20130407 FT407C,0.33,,CAL,ok,3.975679159,58.57623672,20130407 FT407C,0.5,,CAL,ok,3.962964296,78.76496887,20130407 FT407C,0.8,,CAL,ok,3.962144613,118.3574295,20130407,no data,,,ok,NA,NA,

–  –  –

This data is used to calculate fluxes using equation 1 (see paper). It presents the molar volume of an ideal gas calculated from the average air temperature and air pressure during each sampling campaign. It is loaded by script 3.





Header description:

–  –  –

date,Vm_m3_mol 3/27/2013,0.023796417 3/28/2013,0.023471387 3/29/2013,0.023595095 3/30/2013,0.02385484 3/31/2013,0.024129503 4/1/2013,0.023656982 4/2/2013,0.02315533 4/3/2013,0.023044509 4/4/2013,0.02381672 4/5/2013,0.023922762 4/6/2013,0.023345424 4/7/2013,0.024720983

–  –  –

with the Raw gas chromatography data and the Molar volume data. It can be used to run script 4, 5, and 6. Script 6 converts these fluxes to the units presented in fig. 3A of the paper.

Header description:

–  –  –

regression slope from its respective concentration vs. time plot.

“ID”: Code indicating the plot, topological position (Low or High), crop type, and •

–  –  –

Date,fluxL,ID 3/27/2013,-9.15E-08,AHC1 3/27/2013,1.97E-07,AHC2 3/27/2013,-3.03E-08,AHT1 3/27/2013,3.94E-08,AHT2 3/27/2013,-1.96E-07,ALC1 3/27/2013,4.73E-08,ALC2 3/27/2013,2.89E-07,ALT1 3/27/2013,-1.73E-07,ALT2 3/27/2013,-1.17E-07,BHC1 3/27/2013,1.87E-08,BHC2 3/27/2013,3.99E-08,BHT1 3/27/2013,-1.14E-07,BHT2 3/27/2013,6.65E-08,BLC1 3/27/2013,7.21E-08,BLC2 3/27/2013,1.42E-07,BLT1 3/27/2013,2.87E-07,BLT2 3/27/2013,2.15E-07,CHC1 3/27/2013,1.01E-07,CHC2 3/27/2013,-1.70E-07,CHT1 3/27/2013,-7.54E-09,CHT2 3/27/2013,-7.42E-09,CLC1 3/27/2013,7.52E-08,CLC2 3/27/2013,3.54E-08,CLT1 3/27/2013,1.39E-07,CLT2 3/28/2013,1.25E-07,AHC1 3/28/2013,7.73E-08,AHC2 3/28/2013,1.08E-07,AHT1 3/28/2013,-6.99E-08,AHT2 3/28/2013,3.36E-08,ALC1 3/28/2013,5.45E-08,ALC2 3/28/2013,2.24E-07,ALT1 3/28/2013,6.56E-08,ALT2 3/28/2013,1.08E-07,BHC1 3/28/2013,-6.05E-08,BHC2   69   3/28/2013,1.07E-07,BHT1 3/28/2013,1.19E-07,BHT2 3/28/2013,7.31E-08,BLC1 3/28/2013,1.39E-08,BLC2 3/28/2013,1.92E-07,BLT1 3/28/2013,1.89E-07,BLT2 3/28/2013,9.81E-08,CHC1 3/28/2013,-2.16E-08,CHC2 3/28/2013,1.83E-07,CHT1 3/28/2013,1.81E-07,CHT2 3/28/2013,-4.35E-09,CLC1 3/28/2013,-3.18E-08,CLC2 3/28/2013,7.75E-08,CLT1 3/28/2013,2.08E-07,CLT2 3/29/2013,1.16E-07,AHC1 3/29/2013,1.31E-07,AHC2 3/29/2013,7.34E-08,AHT1 3/29/2013,1.44E-07,AHT2 3/29/2013,-5.26E-08,ALC1 3/29/2013,8.29E-08,ALC2 3/29/2013,-9.49E-08,ALT1 3/29/2013,1.37E-07,ALT2 3/29/2013,1.66E-07,BHC1 3/29/2013,1.26E-07,BHC2 3/29/2013,-4.11E-08,BHT1 3/29/2013,-7.43E-09,BHT2 3/29/2013,1.29E-07,BLC1 3/29/2013,-2.39E-07,BLC2 3/29/2013,1.31E-07,BLT1 3/29/2013,1.98E-07,BLT2 3/29/2013,1.44E-07,CHC1 3/29/2013,-2.73E-08,CHC2 3/29/2013,2.07E-07,CHT1 3/29/2013,2.00E-07,CHT2 3/29/2013,-1.74E-07,CLC1 3/29/2013,-5.92E-08,CLC2 3/29/2013,1.45E-07,CLT1 3/29/2013,2.30E-08,CLT2 3/30/2013,-6.25E-08,AHC1 3/30/2013,9.70E-08,AHC2 3/30/2013,5.09E-08,AHT1 3/30/2013,-9.33E-08,AHT2 3/30/2013,4.23E-08,ALC1 3/30/2013,-1.35E-07,ALC2 3/30/2013,1.82E-07,ALT1 3/30/2013,-2.74E-08,ALT2 3/30/2013,7.96E-08,BHC1 3/30/2013,-1.69E-07,BHC2 3/30/2013,7.35E-08,BHT1 3/30/2013,-1.15E-08,BHT2 3/30/2013,2.65E-07,BLC1 3/30/2013,1.01E-07,BLC2 3/30/2013,9.16E-08,BLT1 3/30/2013,1.84E-08,BLT2 3/30/2013,4.77E-08,CHC1 3/30/2013,7.72E-08,CHC2 3/30/2013,-1.08E-07,CHT1 3/30/2013,1.31E-07,CHT2 3/30/2013,4.25E-08,CLC1 3/30/2013,-1.52E-07,CLC2 3/30/2013,5.85E-08,CLT1 3/30/2013,7.11E-08,CLT2   70   3/31/2013,3.09E-07,AHC1 3/31/2013,6.29E-08,AHC2 3/31/2013,1.27E-07,AHT1 3/31/2013,8.68E-08,AHT2 3/31/2013,9.90E-08,ALC1 3/31/2013,-1.12E-07,ALC2 3/31/2013,8.43E-08,ALT1 3/31/2013,1.91E-07,ALT2 3/31/2013,-8.93E-08,BHC1 3/31/2013,-1.63E-08,BHC2 3/31/2013,-1.03E-07,BHT1 3/31/2013,9.09E-08,BHT2 3/31/2013,1.17E-07,BLC1 3/31/2013,3.12E-08,BLC2 3/31/2013,2.03E-08,BLT1 3/31/2013,1.96E-07,BLT2 3/31/2013,-6.47E-08,CHC1 3/31/2013,1.92E-07,CHC2 3/31/2013,5.03E-08,CHT1 3/31/2013,-1.36E-07,CHT2 3/31/2013,8.03E-08,CLC1 3/31/2013,1.65E-08,CLC2 3/31/2013,5.95E-08,CLT1 3/31/2013,3.83E-08,CLT2 4/1/2013,6.62E-08,AHC1 4/1/2013,1.54E-07,AHC2 4/1/2013,-1.91E-07,AHT1 4/1/2013,-3.45E-08,AHT2 4/1/2013,2.52E-07,ALC1 4/1/2013,-5.15E-08,ALC2 4/1/2013,8.51E-08,ALT1 4/1/2013,4.23E-08,ALT2 4/1/2013,4.80E-08,BHC1 4/1/2013,3.20E-07,BHC2 4/1/2013,1.19E-07,BHT1 4/1/2013,1.18E-07,BHT2 4/1/2013,-1.18E-07,BLC1 4/1/2013,-2.16E-07,BLC2 4/1/2013,2.46E-07,BLT1 4/1/2013,1.62E-07,BLT2 4/1/2013,-2.91E-08,CHC1 4/1/2013,-1.42E-08,CHC2 4/1/2013,-2.25E-07,CHT1 4/1/2013,9.48E-08,CHT2 4/1/2013,2.90E-08,CLC1 4/1/2013,2.46E-07,CLC2 4/1/2013,-1.64E-07,CLT1 4/1/2013,4.06E-09,CLT2 4/2/2013,7.90E-08,AHC1 4/2/2013,8.86E-08,AHC2 4/2/2013,2.34E-07,AHT1 4/2/2013,-2.14E-08,AHT2 4/2/2013,-1.23E-09,ALC1 4/2/2013,1.38E-07,ALC2 4/2/2013,-9.55E-08,ALT1 4/2/2013,-3.35E-08,ALT2 4/2/2013,-1.02E-07,BHC1 4/2/2013,7.20E-08,BHC2 4/2/2013,1.96E-07,BHT1 4/2/2013,4.82E-08,BHT2 4/2/2013,-1.18E-07,BLC1 4/2/2013,2.00E-07,BLC2   71   4/2/2013,1.87E-07,BLT1 4/2/2013,1.66E-07,BLT2 4/2/2013,-2.56E-07,CHC1 4/2/2013,2.04E-07,CHC2 4/2/2013,-2.26E-07,CHT1 4/2/2013,-3.08E-08,CHT2 4/2/2013,-9.14E-08,CLC1 4/2/2013,4.52E-08,CLC2 4/2/2013,-7.93E-08,CLT1 4/2/2013,3.82E-08,CLT2 4/3/2013,1.20E-07,AHC1 4/3/2013,-3.17E-10,AHC2 4/3/2013,-2.18E-08,AHT1 4/3/2013,-2.46E-07,AHT2 4/3/2013,2.88E-08,ALC1 4/3/2013,-1.51E-08,ALC2 4/3/2013,2.11E-07,ALT1 4/3/2013,-3.15E-08,ALT2 4/3/2013,-6.45E-08,BHC1 4/3/2013,-1.37E-08,BHC2 4/3/2013,-1.98E-07,BHT1 4/3/2013,-1.04E-07,BHT2 4/3/2013,-1.32E-07,BLC1 4/3/2013,1.05E-07,BLC2 4/3/2013,5.87E-08,BLT1 4/3/2013,5.57E-07,BLT2 4/3/2013,1.13E-07,CHC1 4/3/2013,2.34E-07,CHC2 4/3/2013,-7.90E-08,CHT1 4/3/2013,-1.44E-07,CHT2 4/3/2013,4.57E-09,CLC1 4/3/2013,-1.32E-07,CLC2 4/3/2013,-8.64E-08,CLT1 4/3/2013,1.35E-07,CLT2 4/4/2013,-3.41E-08,AHC1 4/4/2013,-1.58E-07,AHC2 4/4/2013,6.55E-09,AHT1 4/4/2013,-1.77E-08,AHT2 4/4/2013,1.38E-07,ALC1 4/4/2013,-2.05E-07,ALC2 4/4/2013,3.36E-08,ALT1 4/4/2013,-3.59E-08,ALT2 4/4/2013,4.50E-08,BHC1 4/4/2013,-1.75E-07,BHC2 4/4/2013,-2.59E-08,BHT1 4/4/2013,1.47E-07,BHT2 4/4/2013,1.94E-07,BLC1 4/4/2013,2.07E-07,BLC2 4/4/2013,2.65E-07,BLT1 4/4/2013,2.03E-06,BLT2 4/4/2013,1.73E-07,CHC1 4/4/2013,4.52E-07,CHC2 4/4/2013,4.88E-09,CHT1 4/4/2013,1.51E-08,CHT2 4/4/2013,-5.56E-08,CLC1 4/4/2013,1.88E-07,CLC2 4/4/2013,7.42E-08,CLT1 4/4/2013,4.85E-07,CLT2 4/5/2013,-2.91E-09,AHC1 4/5/2013,2.70E-07,AHC2 4/5/2013,2.67E-07,AHT1 4/5/2013,8.61E-08,AHT2   72   4/5/2013,-1.53E-07,ALC1 4/5/2013,6.30E-09,ALC2 4/5/2013,3.48E-07,ALT1 4/5/2013,2.55E-07,ALT2 4/5/2013,-1.55E-07,BHC1 4/5/2013,5.01E-08,BHC2 4/5/2013,2.24E-07,BHT1 4/5/2013,1.63E-07,BHT2 4/5/2013,5.45E-08,BLC1 4/5/2013,-1.06E-07,BLC2 4/5/2013,-1.88E-07,BLT1 4/5/2013,9.79E-08,BLT2 4/5/2013,8.93E-08,CHC1 4/5/2013,1.59E-07,CHC2 4/5/2013,2.71E-07,CHT1 4/5/2013,-1.13E-07,CHT2 4/5/2013,6.13E-08,CLC1 4/5/2013,-2.33E-07,CLC2 4/5/2013,-9.21E-08,CLT1 4/5/2013,3.20E-07,CLT2 4/6/2013,-4.39E-08,AHC1 4/6/2013,1.55E-07,AHC2 4/6/2013,4.49E-08,AHT1 4/6/2013,-3.77E-08,AHT2 4/6/2013,-1.32E-08,ALC1 4/6/2013,6.52E-08,ALC2 4/6/2013,1.96E-07,ALT1 4/6/2013,2.87E-07,ALT2 4/6/2013,1.40E-07,BHC1 4/6/2013,1.16E-07,BHC2 4/6/2013,3.49E-08,BHT1 4/6/2013,-3.97E-08,BHT2 4/6/2013,1.40E-07,BLC1 4/6/2013,1.59E-08,BLC2 4/6/2013,3.60E-07,BLT1 4/6/2013,4.17E-07,BLT2 4/6/2013,-1.18E-09,CHC1 4/6/2013,8.37E-08,CHC2 4/6/2013,5.21E-08,CHT1 4/6/2013,-3.27E-08,CHT2 4/6/2013,1.55E-07,CLC1 4/6/2013,2.92E-07,CLC2 4/6/2013,7.49E-09,CLT1 4/6/2013,2.87E-07,CLT2 4/7/2013,-1.60E-07,AHC1 4/7/2013,-2.59E-08,AHC2 4/7/2013,-9.45E-08,AHT1 4/7/2013,5.08E-08,AHT2 4/7/2013,1.17E-07,ALC1 4/7/2013,-4.26E-08,ALC2 4/7/2013,2.21E-07,ALT1 4/7/2013,1.69E-08,ALT2 4/7/2013,1.47E-07,BHC1 4/7/2013,2.33E-07,BHC2 4/7/2013,4.07E-07,BHT1 4/7/2013,-2.00E-08,BHT2 4/7/2013,-7.46E-08,BLC1 4/7/2013,8.97E-08,BLC2 4/7/2013,1.28E-07,BLT1 4/7/2013,-3.00E-08,BLT2 4/7/2013,1.39E-07,CHC1 4/7/2013,6.05E-08,CHC2   73   4/7/2013,-1.94E-07,CHT1 4/7/2013,3.36E-08,CHT2 4/7/2013,1.55E-07,CLC1 4/7/2013,-5.73E-08,CLC2 4/7/2013,1.22E-07,CLT1 4/7/2013,-7.86E-08,CLT2

–  –  –

This data presents the measured above-ground biomass of each chamber. It is plotted in fig. 4 and 5 in the paper. It is not used by the scripts presented in this document.

Header description:

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ID,total_dry_g AHT-1,24.0039604 AHT-2,11.34609375 AHC-1,56.8627451 AHC-2,60.71428571 ALT-1,24.15813953 ALT-2,22.51315789 ALC-1,36.97777778 ALC-2,39.34457831 BHT-1,30.83109756 BHT-2,18.46388889 BHC-1,38.75744681 BHC-2,33.77777778 BLT-1,20.17241379 BLT-2,8.981132075 BLC-1,31.62972973 BLC-2,41.34036145 CHT-1,12.41714286 CHT-2,24.81203008 CHC-1,42.39375 CHC-2,62.94036145 CLT-1,48.96337209 CLT-2,37.02857143 CLC-1,33.95694444 CLC-2,36.97133758

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This data presents the 3 thermometer and 3 TDR observations at each subplot for each day of observation. This data is plotted in fig. 3B and 3C in the paper, it is not used by the scripts presented in this document.

Header description:

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“theta1”, “theta2”, “theta3”: TDR readings indicating volumetric water content (un calibrated) of the top 12cm of soil. The three readings were averaged for each subplot.

“T1”, ”T2”, “T3”: Thermometer readings indicating soil temperature at 2.5cm depth.

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